Selected Authored Articles
High-Performance Computing Center Stuttgart (HLRS)
> HLRS 2023 Annual Report (writer and editor)
> HPC in Transition: Hunter and Herder Will Bring New Opportunities, New Challenges
> Machine Learning in Computational Fluid Dynamics: An Interview with Andrea Beck
> Molecular Simulations of Ammonia Mixtures Support Search for Renewable Fuels
> Supercomputing Academy Offers Path to HPC Expertise
> High-Resolution Simulations Enable Better Understanding of Extreme Weather
> Coherent File Format Accelerates Time-to-Solution with OpenFOAM
> Vlasiator Provides Global Model of Earth’s Magnetosphere
> Simulation Enables Development of Cleaner Diesel-Powered Vehicles
> HLRS 2022 Annual Report (lead editor and writer)
> On the Way to the Next Generation of High-Performance Computing
> The Future of Atmospheric Simulation: An Interview with Thomas Schwitalla
> Combining HPC with Computers in Wind Farms
> Supercomputing nachhaltiger gestalten (DFN Mitteilungen, PDF)
> Stuttgart Research Initiative Will Support Energy Transformation in Local Communities
> Virtual Reality Supports Transition to Renewable Energy
> Medical Solution Center Will Bring HPC to Medical Technology Industry
> HLRS 2021 Annual Report (lead editor and writer)
> HPC That Breathes: An Interview with Monica Wierse
> Digital Twins Can Support Planning in Cities and Municipalities
> IKILeUS to Integrate AI in University Education
> HLRS to Improve Urgent Computing Capabilities
> Saving Energy in Data Centers through More Efficient Cooling
> Ten Years of Sustainability Strategy at HLRS
> HLRS 2020 Annual Report (lead editor and writer)
> High-Performance Computing in the Year of COVID-19
> How Artificial Intelligence Could Improve Robotics: An Interview with Marco Huber
> HLRS to Create Digital Twin of Historic Ludwigsburg Palace Theater
> Hawk Expansion Will Accelerate Research Combining Simulation and Artificial Intelligence
> International Project Will Create Data Infrastructure for Pandemic Research
> New Research Program to Focus on Trust and Information
> HLRS Will Help Build National Data Research Infrastructure for Catalysis Research
> EuroCC and CASTIEL Will Build European Network of HPC Expertise
> Preparing for the Future of AI
> New Visions for HPC and the Media Arts
> HLRS 2019 Annual Report (lead editor and writer)
> Shining Light on Dark Data
> Putting Ethics into Practice in Artificial Intelligence
> HiDALGO: Merging HPC and High-Performance Data Analytics to Address Global Challenges
> Simulation Using LEGO Tests Car Crash Modeling
> International Workshop Looks at Trends in Industrial HPC Usage
> Visiting Scholars Look Inside Simulation’s “Black Box”
> How HLRS Empowers Computational Engineering
> HLRS 2018 Annual Report (lead editor and writer)
> Supercomputing Enables Sound Prediction Model for Controlling Noise
> HLRS Visualization Supports Stuttgart 21 Construction
> Computational Chemistry Supports Research on New Semiconductor Technologies
> Art Project Visualizes Air Quality Problems in Stuttgart
> Bringing HPC to the Auto Industry: 10 Years of the Automotive Simulation Center Stuttgart
> “Do Good and Teach About It”: HPC Training at HLRS
> HLRS 2017 Annual Report (lead editor and writer, PDF)
> High-Performance Computing Supports Sustainability: An Interview with Claus-Peter Hutter
> The Promise and Perils of Simulation in the Social Sciences
> Investigating Wind Energy Generation on Complex Terrain
> HLRS Researchers Support Development of MULTI Elevator System
Columbia University Department of Systems Biology
> Database of Protein-Protein Interactions Opens New Possibilities for Systems Biology
> Automated, Single Cell RNA-Seq Enables Research on Tumor Ecology
> A Jack of All Trades: An Interview with Kam Leong
> Method for Determining Protein Function Opens Opportunities for Precision Cancer Medicine
> Study of Glioblastoma Tumor Evolution Reveals Strategies Against Advanced Disease
> Graduate Students Invent Technique for Reprogramming Translation
> Columbia Expands Its Microbiome Research
> How Genomic Data Are Changing Population Genetics: An Interview with Molly Przeworski
> Department of Systems Biology Opens New Biotechnology Research Hub
> Columbia Launches Undergraduate Synthetic Biology Team
> New Graduate Course Focuses on Foundations of Deep Sequencing
> Promising New Targets for Treating HER2-Positive Breast Cancer
> New Algorithm Accurately Predicts Drug Mechanism of Action
> Method for Analysing Single-Cell Data Identifies AML Stem Cells
> Mechanism of Kidney Transplant Tolerance Discovered
> Columbia Investigators Awarded New NCI Physical Sciences in Oncology Center
> Connections Found between Mendelian Diseases and Cancer
> The Exposome: Connecting Environmental Factors to Human Disease
> Columbia Researchers Will Use Master Regulators to Reclassify Cancer Subtypes
> Distinguishing Patterns of Tumor Evolution in Chronic Lymphocytic Leukemia
> Machine Learning Method Expands the Landscape of Breast Cancer Driver Genes
> Algorithm Identifies Genetic Driver of Mesenchymal Glioblastoma
> Improving Single-Cell RNA-Seq at the Columbia Genome Center
> New Directions in Genome Engineering: An Interview with Harris Wang
> Researchers Create Comprehensive Map of Human B Cell Development
> Highlights & Celebrations from the 6th Annual RECOMB/ISCB Conference on Regulatory and Systems Genomics, with DREAM Challenges
> Systems Biology Throws You Out of the Box: An Interview with Saeed Tavazoie
> Imaging Synapses Using Fluorescent Small Molecule Probes
> A Topological Approach to Modeling Evolution
> Uniting Structural and Systems Biology: An Interview with Barry Honig
New York Academy of Sciences
> A Dangerous Divide: The Two Cultures in the Twenty-First Century
> Water and Health: Global Issues and Our Shared Responsibilities
> Green Building Solutions: What’s Working?
> Origins of Time’s Arrow
Editorial Work
Cancer overviews at Memorial Sloan-Kettering Cancer Center
(Full disclosure: These documents are always evolving to reflect new advances in research and treatment and so may have changed since I published them.)
> Prostate Cancer (with Helen Garey and Celia Gittelson)
> Colorectal Cancer (with James Stallard)
> Lung Cancer
> Spine Tumors (with Helen Garey)
> Benign Blood Disorders (with Helen Garey)
New York Academy of Sciences eBriefings
A small selection of the nearly 300 eBriefings that were published during my time as editor of the NYAS website.
> From Mirror Neurons to the Mona Lisa: Visual Art and the Brain (author: Catherine Zandonella)
> Creating Climate-Resilient Cities: Progress in NYC and Beyond (author: Christine Van Lenten)
> Songs of Experience: Music and the Brain (author: Kathleen McGowan)
> Translational Cancer Research: Bench, Bedside, and Community (author: Megan Stephan)
Video Interviews at the New York Academy of Sciences
> The Dendritic Cell: An Interview with Ralph Steinman
> Letting the Data Speak: An Interview with Tony Jebara
> The Challenge of Climate Change: An Interview with Michael Oppenheimer
> From the Genetic Code to Telomerase: An Interview with Thomas Cech
> Chromosome Ends and Rogue Cells: An Interview with Elizabeth Blackburn